Related-substances profiling
Naming impurities instead of totalling them: what it enables, how assignment works, and why an impurity fingerprint identifies a bulk.
Deliberately damaging a sample to prove the method can see damage — and what the resulting degradant profile says about storage.
A purity method that cannot separate a compound from its degradation products is not stability-indicating, and a stability claim made with a non-stability-indicating method is worthless. Forced degradation is how you find out which you have.
| Stress | Condition | Expected degradants in peptides |
|---|---|---|
| Acid hydrolysis | 0.1 M HCl, 60 °C, 2–24 h | Backbone cleavage at Asp-Pro; pyroglutamate ring opening; ethylamide/amide hydrolysis |
| Base hydrolysis | 0.1 M NaOH, 25 °C, 1–8 h | Aspartimide and β-Asp; deamidation; lipid-side-chain amide hydrolysis; racemisation |
| Oxidation | 0.3–3 % H₂O₂, 25 °C, 1–24 h | Met sulfoxide then sulfone; Trp oxindole and kynurenine; His 2-oxo-His; Cys to sulfonic acid |
| Thermal | 60–80 °C, dry, 1–14 d | Aggregation; deamidation; diketopiperazine from N-terminal Pro |
| Photolytic | ICH Q1B option 2, 1.2 M lux·h + 200 W·h/m² UV | Trp and Tyr oxidation; cis/trans isomerisation in the non-peptide adjuncts |
| Reduction | 5 mM DTT or TCEP, 25 °C, 30 min | Open-chain form of every disulfide-containing compound |
| Freeze–thaw | 5 cycles, −20 °C to 25 °C | Aggregation; particulate formation |
The target is 5–20 % degradation. Below that the degradants may not be detectable; above it, secondary degradation products of the primary degradants confuse the picture and the mass balance stops closing.
Two useful things. First, it identifies each compound's degradation pathways, which is what the "known degradants" field on every compound page records — and that in turn is what allows a submitted impurity to be classified as a storage finding rather than a synthesis finding. A des-Gly deletion sequence does not form in a vial; a methionine sulfoxide does. That distinction determines whether a poor result is the supplier's problem or the shipping route's.
Second, it sets the expectation for what a stressed lot looks like. When a submitted report shows a degradant profile matching a known oxidative pathway with nothing else out of place, the most likely explanation is exposure rather than manufacture, and the index says so on the record.
Cited because they are the documents the acceptance criteria above are taken from. The index applies them as written and states every deviation.
Naming impurities instead of totalling them: what it enables, how assignment works, and why an impurity fingerprint identifies a bulk.
The eight validation characteristics, what each one demonstrates, and which of them the reports in this index actually document.
The three cheapest measurements on a vial, what each one actually diagnoses, and why the index prints them verbatim.